Is your school providing the legally mandated continuum of alternative placements? Inclusion is great, but the students should have the ability to have study halls in the resource room if they need it, or even to have a single subject in a self contained classroom (for example, English for someone with a written expressive language disorder).
I have several students included in my regular education classrooms. In fact, most of the LD and ADHD students in my school are in inclusion for most of the day. They do, however, have 1 period in the resource room.
As a regular education teacher who is working on my mild/moderate intervention certification (to add to my mathematics and general science certifications), I highly recommend seeking out a continuing education class on inclusion and teaming.
I am not sure what advice to give you, but it might help if both you and the regular ed teacher helped not only the students with LD but all students in the class so that the more typical students didn't know who was LD or not. I know I would have been mortified if people in my regular ed classes knew I attended special education English, or example.
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